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docs: Update GitHub app configurations section in Usage.md

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Usage.md
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@ -142,8 +142,7 @@ num_code_suggestions=1
Then you will overwrite the default number of code suggestions to 1.
#### GitHub app automatic tools
The [github_app](pr_agent/settings/configuration.toml#L76) section defines GitHub app-specific configurations.
In this section, you can define configurations to control the conditions for which tools will **run automatically**.
The [github_app](pr_agent/settings/configuration.toml#L108) section defines GitHub app specific configurations.
##### GitHub app automatic tools for PR actions
The configuration parameter `pr_commands` defines the list of tools that will be **run automatically** when a new PR is opened.
@ -222,7 +221,7 @@ Specifically, start by setting the following environment variables:
github_action_config.auto_improve: "false" # enable\disable auto improve
```
`github_action_config.auto_review`, `github_action_config.auto_describe` and `github_action_config.auto_improve` are used to enable/disable automatic tools that run when a new PR is opened.
If not set, the default option is that only the `review` tool will run automatically when a new PR is opened.
If not set, the default option is that all three tools will run automatically when a new PR is opened.
Note that you can give additional config parameters by adding environment variables to `.github/workflows/pr_agent.yml`, or by using a `.pr_agent.toml` file in the root of your repo, similar to the GitHub App usage.